C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fatty acid desaturase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000350997 FADS1-001 ENSG00000149485 9606 - 11:61799625-61817162 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000350997
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000350997 7.383±0.00 7.392±0.00 28.611±20.74 8.106±0.00 3.840±2.61 4.922±2.81 8.212±0.00 10.261±5.03 7.478±4.56 3.166±0.00 18.773±16.47 14.668±4.33 11.772±1.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0001 VISTA 11:61244303-61847279
CIL_0002MK CIL_0002MK_0001 CGP 11:61792980-61867354

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000248 TAS C-5 sterol desaturase activity
GO:0005506 IEA iron ion binding
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0006629 IEA lipid metabolic process
GO:0006633 IEA fatty acid biosynthetic process
GO:0006636 IEA unsaturated fatty acid biosynthetic process
GO:0007267 NAS cell-cell signaling
GO:0007568 IEA aging
GO:0007584 IEA response to nutrient
GO:0008654 TAS phospholipid biosynthetic process
GO:0009267 IDA cellular response to starvation
GO:0009744 IEA response to sucrose
GO:0010033 IEA response to organic substance
GO:0014070 IEA response to organic cyclic compound
GO:0016020 NAS membrane
GO:0016021 NAS integral component of membrane
GO:0016491 IDA oxidoreductase activity
GO:0016717 IEA oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0019369 IEA arachidonic acid metabolic process
GO:0020037 IEA heme binding
GO:0032868 IEA response to insulin
GO:0033189 IEA response to vitamin A
GO:0033559 TAS unsaturated fatty acid metabolic process
GO:0035900 IEA response to isolation stress
GO:0036109 TAS alpha-linolenic acid metabolic process
GO:0043231 NAS intracellular membrane-bounded organelle
GO:0043651 TAS linoleic acid metabolic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045595 NAS regulation of cell differentiation
GO:0046456 TAS icosanoid biosynthetic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000010807 Fads1-201 protein_coding Mus_musculus 0 1458

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