C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centromere protein L
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356198 CENPL-001 ENSG00000120334 9606 - 1:173799550-173824322 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungOvaryENST00000356198
Transcript ID Adrenal Brain Lung Ovary
ENST00000356198 0.825±0.00 0.679±0.00 0.365±0.00 1.588±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WG CIL_0001WG_0002 CGP 1:173714941-173824720
CIL_0001WF CIL_0001WF_0002 CGP 1:173799550-173858546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000775 IEA chromosome, centromeric region
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143486 Cenpl-003 nonsense_mediated_decay Mus_musculus 0 773
ENSMUST00000111618 Cenpl-004 protein_coding Mus_musculus 0 773
ENSMUST00000111620 Cenpl-002 protein_coding Mus_musculus 0 773
ENSMUST00000028035 Cenpl-001 protein_coding Mus_musculus 0 651
ENSMUST00000155808 Cenpl-005 processed_transcript Mus_musculus 0 555
ENSMUST00000029674 Efna4-001 protein_coding Mus_musculus 0.000000005 68
ENSMUST00000140795 Abat-002 retained_intron Mus_musculus 0.00000007 64

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