C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 4-aminobutyrate aminotransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140795 Abat-002 ENSMUSG00000057880 10090 + 16:8513483-8580688 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RL CIL_0007RL_0002 VISTA 16:7923606-8524476
CIL_0000ER CIL_0000ER_0002 CGP 16:8470788-8621568
CIL_0000EU CIL_0000EU_0002 CGP 16:8513429-8637712

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225388 NUFIP2-001 protein_coding Homo_sapiens 0.00002 58
ENST00000228425 PPFIBP1-001 protein_coding Homo_sapiens 0.00003 57
ENST00000261326 MOCOS-001 protein_coding Homo_sapiens 0.000009 58
ENST00000261520 ICE2-001 protein_coding Homo_sapiens 0.0005 53
ENST00000297477 TMEM184A-001 protein_coding Homo_sapiens 0.000002 60
ENST00000306984 MPLKIP-001 protein_coding Homo_sapiens 0.00001 58
ENST00000318304 PPFIBP1-007 protein_coding Homo_sapiens 0.00003 57
ENST00000319018 TMEM184A-002 nonsense_mediated_decay Homo_sapiens 0.000002 60
ENST00000321039 VN1R1-001 protein_coding Homo_sapiens 0.0000009 60
ENST00000345664 CENPL-003 protein_coding Homo_sapiens 0.00000006 64
ENST00000355484 FADS2-014 protein_coding Homo_sapiens 0.00001 57
ENST00000356198 CENPL-001 protein_coding Homo_sapiens 0.00000007 64
ENST00000367710 CENPL-002 protein_coding Homo_sapiens 0.00000005 64
ENST00000368311 SSR2-002 retained_intron Homo_sapiens 0.000007 58
ENST00000379170 MCUR1-001 protein_coding Homo_sapiens 0.000008 58
ENST00000398953 AACS-014 processed_transcript Homo_sapiens 0.0000002 60
ENST00000418971 COLEC11-202 protein_coding Homo_sapiens 0.0000002 62
ENST00000421996 TMEM184A-012 processed_transcript Homo_sapiens 0.0000002 60
ENST00000426501 HERC2P3-006 processed_transcript Homo_sapiens 0.0001 55
ENST00000435634 EXOSC6-001 protein_coding Homo_sapiens 0.000002 60
ENST00000438814 COLEC11-009 protein_coding Homo_sapiens 0.00000006 62
ENST00000438937 ZSCAN21-002 protein_coding Homo_sapiens 0.000001 58
ENST00000449955 TMEM184A-010 processed_transcript Homo_sapiens 0.0000009 60
ENST00000454147 SLC6A11-002 protein_coding Homo_sapiens 0.000004 58
ENST00000459629 AVL9-004 processed_transcript Homo_sapiens 0.00004 57
ENST00000471602 ANAPC7-005 retained_intron Homo_sapiens 0.00002 55
ENST00000488118 XPNPEP1-001 retained_intron Homo_sapiens 0.00008 55
ENST00000490672 KRTCAP2-003 processed_transcript Homo_sapiens 0.0000001 64
ENST00000503931 SERF1B-008 protein_coding Homo_sapiens 0.0000002 60
ENST00000504458 SERF1A-003 protein_coding Homo_sapiens 0.0000002 60
ENST00000522208 RNF130-004 protein_coding Homo_sapiens 0.000001 62
ENST00000528017 ZNF7-006 retained_intron Homo_sapiens 0.0000006 62
ENST00000537927 PPFIBP1-003 protein_coding Homo_sapiens 0.00003 57
ENST00000558090 HOMER2-005 protein_coding Homo_sapiens 0.0000003 64
ENST00000558121 ICE2-007 retained_intron Homo_sapiens 0.0002 53
ENST00000558181 ICE2-002 nonsense_mediated_decay Homo_sapiens 0.0005 53
ENST00000562801 GPT2-006 retained_intron Homo_sapiens 0.000003 58
ENST00000564072 SLCO3A1-014 retained_intron Homo_sapiens 0.000003 58
ENST00000568900 SPNS1-004 retained_intron Homo_sapiens 0.000003 58
ENST00000586526 CLLU1-005 retained_intron Homo_sapiens 0.000003 58
ENST00000597852 CD37-003 retained_intron Homo_sapiens 0.00006 55
ENST00000611952 SERF1B-008 protein_coding Homo_sapiens 0.0000002 60

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