C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin (CD79A) binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356413 IGBP1-002 ENSG00000089289 9606 + X:70133463-70166324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356413
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356413 29.468±0.00 22.421±0.00 7.013±0.00 15.418±3.49 16.111±3.51 27.731±16.57 12.373±5.61 12.558±5.37 8.839±3.51 14.498±7.86 25.178±14.52 33.703±13.87 29.554±5.33 15.967±7.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RE CIL_0002RE_0001 CGP X:70062491-70166324
CIL_0002RD CIL_0002RD_0001 CGP X:70133449-70205545

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IPI protein binding
GO:0005737 NAS cytoplasm
GO:0007165 NAS signal transduction
GO:0008601 IDA protein phosphatase type 2A regulator activity
GO:0009966 IEA regulation of signal transduction
GO:0032873 IMP negative regulation of stress-activated MAPK cascade
GO:0034612 IMP response to tumor necrosis factor
GO:0042113 IEA B cell activation
GO:0043154 IMP negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0060632 IMP regulation of microtubule-based movement
GO:0070555 IMP response to interleukin-1

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033570 Igbp1-001 protein_coding Mus_musculus 0 1164
ENSMUST00000144881 Igbp1-003 retained_intron Mus_musculus 0 542

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