C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356448 ARHGEF26-001 ENSG00000114790 9606 + 3:154121003-154257827 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000356448
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000356448 0.685±0.00 6.001±0.00 0.765±0.00 1.400±0.00 0.310±0.00 2.829±0.00 0.827±0.00 3.039±0.00 0.751±0.20 1.675±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066Q CIL_00066Q_0001 CGP 3:154121003-154324497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001886 IEA endothelial cell morphogenesis
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0042995 IEA cell projection
GO:0097178 IEA ruffle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079300 Arhgef26-001 protein_coding Mus_musculus 0 2595
ENSMUST00000163008 Arhgef26-002 processed_transcript Mus_musculus 0 977
ENSMUST00000161057 Arhgef26-005 protein_coding Mus_musculus 0 924
ENSMUST00000161493 Arhgef26-004 retained_intron Mus_musculus 0 497
ENSMUST00000159746 Arhgef26-003 processed_transcript Mus_musculus 0 490

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