C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: branched chain keto acid dehydrogenase E1, beta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356489 BCKDHB-005 ENSG00000083123 9606 + 6:80106647-80346254 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356489 1.605±0.00 0.942±0.00 2.354±0.00 2.261±0.00 3.324±0.23 3.761±0.00 3.089±1.63 5.722±3.14 4.818±2.29 0.677±0.00 1.921±1.01 2.229±1.24 1.371±0.86 2.810±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G6 CIL_0006G6_0001 CGP 6:80003887-80346270

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0003863 IEA 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
GO:0005515 IPI protein binding
GO:0005739 IMP mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0005947 IMP mitochondrial alpha-ketoglutarate dehydrogenase complex
GO:0008152 IEA metabolic process
GO:0009083 IMP branched-chain amino acid catabolic process
GO:0016831 TAS carboxy-lyase activity
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034801 Bckdhb-201 protein_coding Mus_musculus 0 1295
ENSMUST00000190637 Bckdhb-002 protein_coding Mus_musculus 0 1295
ENSMUST00000190166 Bckdhb-007 protein_coding Mus_musculus 0 1249

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