C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006G6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112742-ENSG00000083123 CGP 9606 6:80003887-80346270
GeneTranscriptPositionBiotype
ENSG00000083123 (BCKDHB)
branched chain keto acid dehydrogenase E1, beta polypeptide 		ENST00000320393 (BCKDHB-004) 80106647-80346270 protein_coding
ENST00000356489 (BCKDHB-005) 80106647-80346254 protein_coding
ENST00000369760 (BCKDHB-002) 80106647-80169873 protein_coding
ENST00000468520 (BCKDHB-001) 80203102-80273190 processed_transcript
ENST00000486968 (BCKDHB-003) 80127269-80135887 processed_transcript
ENST00000491328 (BCKDHB-006) 80343571-80346254 retained_intron
ENST00000545529 (BCKDHB-201) 80106666-80346270 protein_coding
ENSG00000112742 (TTK)
TTK protein kinase 		ENST00000230510 (TTK-002) 80004147-80042527 protein_coding
ENST00000369798 (TTK-001) 80004605-80042527 protein_coding
ENST00000430061 (TTK-009) 80005941-80011553 retained_intron
ENST00000502580 (TTK-005) 80004710-80008440 protein_coding
ENST00000504040 (TTK-006) 80005802-80010871 protein_coding
ENST00000504590 (TTK-010) 80037553-80040271 retained_intron
ENST00000509313 (TTK-007) 80004650-80008416 nonsense_mediated_decay
ENST00000509894 (TTK-003) 80003887-80042527 protein_coding
ENST00000511260 (TTK-004) 80004834-80008475 protein_coding
ENST00000515751 (TTK-008) 80013455-80027950 processed_transcript
ENSG00000218418 (RP11-296E7.1)
 ENST00000401578 (RP11-296E7.1-001) 80064286-80070199 processed_pseudogene
CIL_0006G6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038379-ENSMUSG00000032263 CGP 10090 9:83834689-84124240
GeneTranscriptPositionBiotype
ENSMUSG00000032263 (Bckdhb)
branched chain ketoacid dehydrogenase E1, beta polypeptide 		ENSMUST00000034801 (Bckdhb-201) 83925150-84124239 protein_coding
ENSMUST00000186136 (Bckdhb-004) 84107507-84124240 processed_transcript
ENSMUST00000188200 (Bckdhb-001) 84045887-84124239 processed_transcript
ENSMUST00000189819 (Bckdhb-006) 84035840-84124198 processed_transcript
ENSMUST00000190166 (Bckdhb-007) 83948781-84124240 protein_coding
ENSMUST00000190637 (Bckdhb-002) 83925145-84124239 protein_coding
ENSMUSG00000038379 (Ttk)
Ttk protein kinase 		ENSMUST00000070326 (Ttk-001) 83834718-83872386 protein_coding
ENSMUST00000185913 (Ttk-004) 83834690-83872389 protein_coding
ENSMUST00000186277 (Ttk-007) 83834741-83844427 processed_transcript
ENSMUST00000188445 (Ttk-002) 83834689-83869493 retained_intron
ENSMUST00000189727 (Ttk-003) 83834734-83837535 retained_intron
ENSMUST00000191484 (Ttk-006) 83834766-83843091 protein_coding
ENSMUSG00000101077 (RP24-255L24.1)
predicted gene 29164 		ENSMUST00000185454 (RP24-255L24.1-001) 83965984-83967007 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006G6_0001ENSG00000083123ENST00000320393ENST00000356489ENST00000369760ENST00000468520ENST00000486968ENST00000491328ENST00000545529ENSG00000112742ENST00000230510ENST00000369798ENST00000430061ENST00000502580ENST00000504040ENST00000504590ENST00000509313ENST00000509894ENST00000511260ENST00000515751ENSG00000218418ENST00000401578CIL_0006G6_0002ENSMUSG00000032263ENSMUST00000034801ENSMUST00000186136ENSMUST00000188200ENSMUST00000189819ENSMUST00000190166ENSMUST00000190637ENSMUSG00000038379ENSMUST00000070326ENSMUST00000185913ENSMUST00000186277ENSMUST00000188445ENSMUST00000189727ENSMUST00000191484ENSMUSG00000101077ENSMUST00000185454
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006G6_0001ENSG00000083123ENST00000320393ENST00000356489ENST00000369760ENST00000545529ENSG00000112742ENST00000230510ENST00000369798ENST00000430061ENST00000502580ENST00000504590ENST00000515751ENSG00000218418ENST00000401578CIL_0006G6_0002ENSMUSG00000032263ENSMUST00000034801ENSMUST00000188200ENSMUST00000189819ENSMUST00000190166ENSMUST00000190637ENSMUSG00000038379ENSMUST00000070326ENSMUST00000185913ENSMUST00000186277ENSMUST00000188445ENSMUST00000189727ENSMUST00000191484ENSMUSG00000101077ENSMUST00000185454
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083123 ENST00000320393 1.280±0.00 1.264±0.00 2.203±0.00 3.921±1.30 2.306±0.56 2.158±0.31 1.671±1.25 5.186±1.47 3.888±0.62 0.901±0.29 0.540±0.03 2.428±0.08 0.562±0.27 1.614±0.00
ENST00000356489 1.605±0.00 0.942±0.00 2.354±0.00 2.261±0.00 3.324±0.23 3.761±0.00 3.089±1.63 5.722±3.14 4.818±2.29 0.677±0.00 1.921±1.01 2.229±1.24 1.371±0.86 2.810±1.38
ENST00000369760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.003±0.00 4.521±0.04 4.797±0.00 13.815±0.00
ENST00000468520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545529 N/A N/A N/A N/A 0.796±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.481±0.00
ENSG00000112742 ENST00000230510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.288±0.00 N/A N/A
ENST00000369798 N/A N/A 0.040±0.00 0.018±0.00 0.836±0.00 1.107±0.00 0.032±0.00 0.149±0.00 N/A N/A N/A 2.275±1.89 0.812±0.46 18.638±3.32
ENST00000430061 N/A N/A N/A 0.229±0.00 N/A N/A N/A 0.862±0.00 0.096±0.00 0.384±0.00 N/A N/A N/A N/A
ENST00000502580 0.106±0.00 N/A N/A 0.025±0.00 N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A
ENST00000504040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504590 N/A N/A N/A 0.333±0.00 N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.096±0.00 N/A N/A
ENST00000509313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515751 N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218418 ENST00000401578 0.006±0.00 N/A 0.013±0.00 0.028±0.01 0.008±0.00 0.037±0.04 0.009±0.01 N/A 0.006±0.00 0.012±0.00 0.006±0.00 0.018±0.01 0.007±0.00 0.242±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032263 ENSMUST00000034801 25.048±7.22 32.420±0.00 N/A 8.084±0.00 34.816±7.27 5.795±0.00 29.250±2.38 18.333±6.91 16.330±11.98 6.556±1.28 11.901±1.11 5.103±2.49 5.399±3.55 1.598±0.73
ENSMUST00000186136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.409±2.43 12.346±0.00 1.375±0.00
ENSMUST00000189819 N/A N/A N/A N/A 26.081±0.00 N/A N/A N/A N/A 5.770±0.00 8.343±1.12 N/A N/A 1.669±0.00
ENSMUST00000190166 10.165±0.80 N/A 17.543±2.33 2.781±0.68 10.202±0.00 N/A N/A 5.666±0.00 4.608±1.56 N/A 3.431±1.39 10.116±3.48 3.959±1.90 0.929±0.41
ENSMUST00000190637 16.813±8.72 38.289±5.47 9.186±1.90 8.033±2.08 34.653±15.31 7.266±1.03 7.350±2.56 27.148±9.85 31.142±23.83 7.618±3.08 N/A 14.721±2.92 2.625±0.72 2.021±0.07
ENSMUSG00000038379 ENSMUST00000070326 0.378±0.03 N/A 0.215±0.01 3.160±1.23 N/A 0.695±0.11 0.037±0.00 N/A 7.035±2.88 0.287±0.00 N/A 1.522±0.71 5.745±4.15 6.374±1.25
ENSMUST00000185913 0.063±0.03 0.123±0.06 N/A N/A 0.075±0.03 0.506±0.00 0.014±0.00 0.032±0.01 N/A 0.107±0.00 0.049±0.00 0.418±0.15 0.830±0.72 6.498±0.00
ENSMUST00000186277 N/A 0.129±0.00 N/A N/A 0.283±0.17 0.633±0.00 N/A 0.026±0.01 0.162±0.00 N/A 0.042±0.01 1.208±0.57 N/A N/A
ENSMUST00000188445 0.136±0.10 0.137±0.00 0.085±0.00 0.182±0.11 0.090±0.03 0.972±0.02 0.048±0.00 0.037±0.01 N/A 0.208±0.00 0.021±0.00 0.935±0.38 0.391±0.23 2.337±1.01
ENSMUST00000189727 0.020±0.00 N/A N/A 0.015±0.00 N/A N/A 0.016±0.00 0.044±0.02 N/A N/A N/A N/A N/A N/A
ENSMUST00000191484 N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A N/A N/A 0.044±0.00 0.512±0.00 0.476±0.00 N/A
ENSMUSG00000101077 ENSMUST00000185454 0.075±0.01 0.080±0.01 0.015±0.00 0.034±0.01 0.087±0.03 N/A 0.022±0.00 0.131±0.08 0.164±0.14 0.032±0.00 N/A 0.178±0.05 0.049±0.00 0.027±0.00

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