C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: unc-50 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357765 UNC50-001 ENSG00000115446 9606 + 2:98608579-98618515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357765
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357765 10.403±0.00 10.317±0.00 0.697±0.00 6.405±0.62 8.884±3.50 13.454±0.00 5.137±2.60 14.468±8.68 8.644±1.14 9.245±0.35 3.531±1.88 22.647±9.11 27.183±2.29 40.304±16.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034F CIL_00034F_0001 CGP 2:98599310-98618515
CIL_00034E CIL_00034E_0001 CGP 2:98608579-98731126

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003723 IEA RNA binding
GO:0005637 IEA nuclear inner membrane
GO:0005794 IEA Golgi apparatus
GO:0007166 IEA cell surface receptor signaling pathway
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114925 Unc50-002 protein_coding Mus_musculus 0 904
ENSMUST00000027285 Unc50-001 protein_coding Mus_musculus 0 881
ENSMUST00000118059 Unc50-005 protein_coding Mus_musculus 0 878
ENSMUST00000144617 Unc50-003 protein_coding Mus_musculus 0 739
ENSMUST00000134184 Unc50-004 retained_intron Mus_musculus 0 701

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