C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358171 SERPINH1-004 ENSG00000149257 9606 + 11:75562086-75572783 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358171
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358171 72.678±0.00 80.269±0.00 1.268±0.00 2.195±1.35 56.255±39.77 80.514±77.01 11.145±9.46 41.629±39.53 8.054±0.17 271.869±0.00 6.292±3.11 129.351±95.42 254.932±69.80 53.243±33.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NG CIL_0008NG_0001 VISTA 11:75253021-75855707
CIL_0001SV CIL_0001SV_0002 CGP 11:75434640-75572783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004867 IBA serine-type endopeptidase inhibitor activity
GO:0005518 NAS collagen binding
GO:0005615 IEA extracellular space
GO:0005783 NAS endoplasmic reticulum
GO:0005788 TAS endoplasmic reticulum lumen
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0006986 TAS response to unfolded protein
GO:0010951 IBA negative regulation of endopeptidase activity
GO:0030162 IBA regulation of proteolysis
GO:0030198 TAS extracellular matrix organization
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094154 Serpinh1-201 protein_coding Mus_musculus 0 1624
ENSMUST00000169437 Serpinh1-202 protein_coding Mus_musculus 0 1624

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