C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | archain 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000359415  |
ARCN1-003 |
ENSG00000095139 |
9606 | + |
11:118572424-118602928  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00081E | CIL_00081E_0001 | VISTA | 11:118137591-118740525 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0005794 | IDA | Golgi apparatus |
| GO:0006810 | IEA | transport |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0006890 | IEA | retrograde vesicle-mediated transport, Golgi to ER |
| GO:0016192 | IEA | vesicle-mediated transport |
| GO:0030126 | IEA | COPI vesicle coat |
| GO:0030131 | IEA | clathrin adaptor complex |
| GO:0043231 | IDA | intracellular membrane-bounded organelle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000034607
|
Arcn1-001 | protein_coding | Mus_musculus | 0 | 2399 |
|
ENSMUST00000173278
|
Gm8750-001 | processed_pseudogene | Mus_musculus | 0 | 1988 |
|
ENSMUST00000173427
|
Gm8752-001 | processed_pseudogene | Mus_musculus | 0 | 1905 |
|
ENSMUST00000150160
|
Arcn1-002 | retained_intron | Mus_musculus | 0 | 1203 |
|
ENSMUST00000125164
|
Arcn1-003 | processed_transcript | Mus_musculus | 0 | 1000 |
