C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nebulin-related anchoring protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359988 NRAP-001 ENSG00000197893 9606 - 10:113588833-113664127 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleENST00000359988
Transcript ID Liver Muscle
ENST00000359988 0.751±0.00 59.533±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OX CIL_0006OX_0001 CGP 10:112950250-113589602
CIL_0006OW CIL_0006OW_0001 CGP 10:113550837-113664127
CIL_0002GC CIL_0002GC_0001 CGP 10:113588716-113730907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005916 ISS fascia adherens
GO:0005927 ISS muscle tendon junction
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0051371 ISS muscle alpha-actinin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073536 Nrap-001 protein_coding Mus_musculus 0 5373
ENSMUST00000095947 Nrap-003 protein_coding Mus_musculus 0 4307
ENSMUST00000040711 Nrap-002 protein_coding Mus_musculus 0 4307
ENSMUST00000166203 Nrap-006 protein_coding Mus_musculus 0 3757
ENSMUST00000167239 Nrap-004 protein_coding Mus_musculus 0 3474
ENSMUST00000169099 Nrap-005 nonsense_mediated_decay Mus_musculus 0 617

Loading