C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nebulin-related anchoring protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360478 NRAP-201 ENSG00000197893 9606 - 10:113588825-113664070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMusclePlacentaTestisENST00000360478
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Placenta Testis
ENST00000360478 0.069±0.00 0.056±0.00 0.088±0.01 9.678±0.00 0.082±0.02 196.310±134.20 0.169±0.00 0.319±0.00 241.915±211.10 0.305±0.00 3.541±3.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OX CIL_0006OX_0001 CGP 10:112950250-113589602
CIL_0006OW CIL_0006OW_0001 CGP 10:113550837-113664127
CIL_0002GC CIL_0002GC_0001 CGP 10:113588716-113730907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005916 ISS fascia adherens
GO:0005927 ISS muscle tendon junction
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0051371 ISS muscle alpha-actinin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040711 Nrap-002 protein_coding Mus_musculus 0 5240
ENSMUST00000095947 Nrap-003 protein_coding Mus_musculus 0 5000
ENSMUST00000167239 Nrap-004 protein_coding Mus_musculus 0 4405
ENSMUST00000073536 Nrap-001 protein_coding Mus_musculus 0 4301
ENSMUST00000166203 Nrap-006 protein_coding Mus_musculus 0 3757
ENSMUST00000169099 Nrap-005 nonsense_mediated_decay Mus_musculus 0 617

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