C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: capping protein (actin filament) muscle Z-line, alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361183 CAPZA2-002 ENSG00000198898 9606 + 7:116862473-116922049 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361183
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361183 1.842±0.00 4.703±0.00 2.912±0.00 4.053±0.00 4.298±0.00 2.406±0.00 7.052±0.00 4.166±0.00 1.429±0.00 8.987±2.69 3.108±1.41 2.717±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040Q CIL_00040Q_0001 CGP 7:116672390-116922049
CIL_0003QV CIL_0003QV_0001 CGP 7:116811070-117230103

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005829 TAS cytosol
GO:0006461 TAS protein complex assembly
GO:0006928 TAS cellular component movement
GO:0007596 TAS blood coagulation
GO:0008290 IEA F-actin capping protein complex
GO:0015629 TAS actin cytoskeleton
GO:0016020 IEA membrane
GO:0030036 IEA actin cytoskeleton organization
GO:0030863 IEA cortical cytoskeleton
GO:0045087 TAS innate immune response
GO:0051016 IEA barbed-end actin filament capping
GO:0051693 IEA actin filament capping
GO:0070062 IDA extracellular vesicular exosome
GO:0071203 IEA WASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015877 Capza2-001 protein_coding Mus_musculus 0 1644
ENSMUST00000130606 Capza2-007 nonsense_mediated_decay Mus_musculus 0 1400
ENSMUST00000142592 Capza2-004 retained_intron Mus_musculus 0 752
ENSMUST00000156701 Capza2-002 retained_intron Mus_musculus 0 710
ENSMUST00000152005 Capza2-006 processed_transcript Mus_musculus 0 616
ENSMUST00000148694 Capza2-003 processed_transcript Mus_musculus 0 551
ENSMUST00000136771 Capza2-005 processed_transcript Mus_musculus 3e-35 156
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000000003 73

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