C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: capping protein (actin filament) muscle Z-line, alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015877 Capza2-001 ENSMUSG00000015733 10090 + 6:17636983-17666972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015877
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015877 15.390±6.80 4.249±2.03 65.519±5.39 29.025±12.19 15.389±5.18 9.441±1.71 16.168±8.36 12.522±4.58 20.255±12.32 17.406±4.71 92.385±6.09 11.061±11.68 30.241±18.09 4.852±2.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040Q CIL_00040Q_0002 CGP 6:17463800-17666972
CIL_0003QV CIL_0003QV_0002 CGP 6:17636234-17943025

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0008150 ND biological_process
GO:0008290 IPI F-actin capping protein complex
GO:0016020 IDA membrane
GO:0030036 IEA actin cytoskeleton organization
GO:0030863 IDA cortical cytoskeleton
GO:0051693 IEA actin filament capping
GO:0070062 IEA extracellular vesicular exosome
GO:0071203 IEA WASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000046973 capza1a-201 protein_coding Danio_rerio 0 370
ENST00000361183 CAPZA2-002 protein_coding Homo_sapiens 0 1644
ENST00000414148 CAPZA2-015 processed_transcript Homo_sapiens 1e-37 159
ENST00000417431 CAPZA2-014 processed_transcript Homo_sapiens 0 616
ENST00000426421 CAPZA2-013 nonsense_mediated_decay Homo_sapiens 0 1408
ENST00000449080 CAPZA2-004 nonsense_mediated_decay Homo_sapiens 0 994
ENST00000461878 CAPZA2-003 retained_intron Homo_sapiens 2.00386e-43 180
ENST00000464223 CAPZA2-009 protein_coding Homo_sapiens 0 198
ENST00000464669 CAPZA2-005 retained_intron Homo_sapiens 0 723
ENST00000465607 CAPZA2-011 retained_intron Homo_sapiens 0 348
ENST00000466023 CAPZA2-007 processed_transcript Homo_sapiens 0.000000000002 77
ENST00000484325 CAPZA2-010 protein_coding Homo_sapiens 0 202
ENST00000490693 CAPZA2-006 protein_coding Homo_sapiens 0 625
ENST00000496161 CAPZA2-008 retained_intron Homo_sapiens 4.00001e-40 169
ENST00000565906 RP11-320A16.1-001 processed_pseudogene Homo_sapiens 0 905

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