C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: importin 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361565 IPO9-001 ENSG00000198700 9606 + 1:201829141-201884294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361565
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361565 3.498±0.00 3.996±0.00 2.562±0.00 2.605±0.84 2.118±0.47 2.093±0.93 2.693±1.47 2.023±0.38 2.691±0.00 1.640±1.00 3.641±1.12 4.107±0.55 3.594±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LX CIL_0001LX_0002 CGP 1:201829141-201892306

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006606 NAS protein import into nucleus
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding
GO:0008565 IDA protein transporter activity
GO:0016020 IDA membrane
GO:0042393 ISS histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041023 Ipo9-001 protein_coding Mus_musculus 0 4920
ENSMUST00000161189 Ipo9-002 nonsense_mediated_decay Mus_musculus 0 4569
ENSMUST00000161032 Ipo9-003 nonsense_mediated_decay Mus_musculus 0 2597
ENSMUST00000161135 Ipo9-006 retained_intron Mus_musculus 0 1027
ENSMUST00000159017 Ipo9-008 retained_intron Mus_musculus 0 859
ENSMUST00000159173 Ipo9-005 nonsense_mediated_decay Mus_musculus 0 662
ENSMUST00000161838 Ipo9-004 nonsense_mediated_decay Mus_musculus 0 640
ENSMUST00000161934 Ipo9-013 protein_coding Mus_musculus 0 623
ENSMUST00000162858 Ipo9-011 retained_intron Mus_musculus 0 582
ENSMUST00000161750 Ipo9-012 retained_intron Mus_musculus 0 582
ENSMUST00000159089 Ipo9-010 retained_intron Mus_musculus 0 479
ENSMUST00000161704 Ipo9-007 retained_intron Mus_musculus 0 403
ENSMUST00000159487 Ipo9-014 retained_intron Mus_musculus 0 363
ENSMUST00000161258 Ipo9-009 processed_transcript Mus_musculus 0 294
ENSMUST00000145380 Ckmt1-003 retained_intron Mus_musculus 0.00002 58

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