C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E2F transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361729 E2F2-001 ENSG00000007968 9606 - 1:23506430-23531220 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361729
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361729 0.327±0.00 0.771±0.00 0.052±0.03 0.358±0.02 0.644±0.02 0.161±0.00 0.062±0.01 0.014±0.00 0.527±0.34 0.091±0.00 1.803±1.81 1.023±0.72 1.556±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WE CIL_0002WE_0002 CGP 1:23428563-23531220
CIL_0002HZ CIL_0002HZ_0002 CGP 1:23506430-23559794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0001047 IDA core promoter binding
GO:0003677 TAS DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IEA transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0008134 IPI transcription factor binding
GO:0051726 IEA regulation of cell cycle
GO:0072332 IEA intrinsic apoptotic signaling pathway by p53 class mediator
GO:1990086 IEA lens fiber cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061721 E2f2-001 protein_coding Mus_musculus 0 1365
ENSMUST00000149750 E2f2-002 processed_transcript Mus_musculus 0 318
ENSMUST00000102948 E2f3-001 protein_coding Mus_musculus 4.99983e-42 178

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