C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E2F transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102948 E2f3-001 ENSMUSG00000016477 10090 - 13:29906575-29985668 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000102948
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000102948 0.655±0.34 1.147±0.22 1.517±1.11 6.313±0.67 1.246±0.56 1.711±0.54 0.722±0.00 0.546±0.48 1.908±1.21 0.759±0.83 2.121±1.00 2.416±1.55 0.266±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UV CIL_0007UV_0002 VISTA 13:29309186-29911829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001047 IEA core promoter binding
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0008284 IDA positive regulation of cell proliferation
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346618 E2F3-001 protein_coding Homo_sapiens 0 4283
ENST00000361729 E2F2-001 protein_coding Homo_sapiens 4.99983e-42 178
ENST00000447755 E2F3P2-001 processed_pseudogene Homo_sapiens 0 774
ENST00000535432 E2F3-201 protein_coding Homo_sapiens 0 3735
ENST00000589887 RP11-1094M14.9-001 processed_pseudogene Homo_sapiens 0 1206
ENST00000613242 E2F3-202 protein_coding Homo_sapiens 0 2464

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