C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: saccharopine dehydrogenase (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366510 SCCPDH-001 ENSG00000143653 9606 + 1:246724047-246768137 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366510
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366510 11.505±0.00 8.435±0.00 3.945±0.00 20.499±11.81 11.438±8.53 10.041±7.52 6.754±4.10 21.065±1.92 19.360±12.66 11.767±0.00 6.441±2.69 10.979±5.56 15.062±1.96 62.436±20.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AM CIL_0007AM_0002 CGP 1:246566444-246768137

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005811 IDA lipid particle
GO:0016020 IDA membrane
GO:0016491 IEA oxidoreductase activity
GO:0030496 IDA midbody
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040538 Sccpdh-001 protein_coding Mus_musculus 0 1755
ENSMUST00000134287 Sccpdh-004 nonsense_mediated_decay Mus_musculus 0 974
ENSMUST00000143936 Sccpdh-005 protein_coding Mus_musculus 0 418
ENSMUST00000144480 Sccpdh-006 protein_coding Mus_musculus 0 401
ENSMUST00000131039 Sccpdh-002 retained_intron Mus_musculus 0 379

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