C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: consortin, connexin sorting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366513 CNST-001 ENSG00000162852 9606 + 1:246566446-246668584 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366513
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366513 6.719±0.00 1.703±0.00 0.948±0.00 6.817±1.08 3.462±0.15 4.352±0.34 3.843±1.40 1.781±0.63 3.659±1.47 7.097±1.34 4.279±1.35 3.262±1.06 2.089±0.47 7.455±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AN CIL_0007AN_0002 CGP 1:246540560-246668584
CIL_0007AM CIL_0007AM_0002 CGP 1:246566444-246768137

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005802 IDA trans-Golgi network
GO:0005886 IDA plasma membrane
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019902 IDA phosphatase binding
GO:0030133 IDA transport vesicle
GO:0042998 IMP positive regulation of Golgi to plasma membrane protein transport
GO:0043234 IDA protein complex
GO:0071253 ISS connexin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040706 Cnst-001 protein_coding Mus_musculus 0 795
ENSMUST00000143270 Cnst-004 processed_transcript Mus_musculus 0 279

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