C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocase of outer mitochondrial membrane 20 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366607 TOMM20-001 ENSG00000173726 9606 - 1:235109336-235128936 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366607
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366607 36.805±0.00 33.610±0.00 9.632±0.00 33.250±1.05 27.198±19.83 30.215±17.58 17.802±12.44 21.026±10.68 13.761±0.28 20.648±10.43 14.358±10.24 28.226±14.39 25.937±0.74 24.415±11.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KF CIL_0006KF_0001 CGP 1:235109336-235161457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005740 IEA mitochondrial envelope
GO:0005741 IEA mitochondrial outer membrane
GO:0005742 TAS:IEA mitochondrial outer membrane translocase complex
GO:0006605 IEA protein targeting
GO:0006626 IDA protein targeting to mitochondrion
GO:0006886 IEA intracellular protein transport
GO:0015450 IDA P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0044233 IDA ER-mitochondrion membrane contact site
GO:0044267 TAS cellular protein metabolic process
GO:0051082 IDA unfolded protein binding
GO:0071806 IDA protein transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179857 Tomm20-201 protein_coding Mus_musculus 0 797
ENSMUST00000118786 Gm14494-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000117490 Gm13504-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000117206 Gm6964-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000117834 Gm12859-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000122392 Gm15365-001 processed_pseudogene Mus_musculus 0 394

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