C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel, subfamily K, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366621 KCNK1-001 ENSG00000135750 9606 + 1:233614004-233672512 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366621
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366621 0.420±0.00 0.044±0.00 0.250±0.00 7.896±0.13 0.627±0.25 2.258±0.13 3.003±2.55 2.261±2.14 1.108±0.73 3.732±0.00 0.015±0.00 5.510±2.63 4.318±0.54 1.444±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KB CIL_0006KB_0001 CGP 1:233327768-233672512
CIL_0000C3 CIL_0000C3_0002 CGP 1:233614004-234324516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005242 TAS inward rectifier potassium channel activity
GO:0005267 IEA potassium channel activity
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0005886 TAS plasma membrane
GO:0006813 TAS potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 TAS voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0016324 IEA apical plasma membrane
GO:0031526 IEA brush border membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035094 IEA response to nicotine
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046765 Kcnk1-201 protein_coding Mus_musculus 0 1256
ENSDART00000122715 kcnk1a-201 protein_coding Danio_rerio 0 346
ENSDART00000066259 kcnk1a-001 protein_coding Danio_rerio 0 346
ENSDART00000133869 kcnk1a-002 protein_coding Danio_rerio 0 243

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