C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000C3_0001 (Click to Hide/Show)
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Source ID Type Tax ID Position
ENSDARG00000045067-ENSDARG00000075909 CGP 7955 12:32369976-32420706
GeneTranscriptPositionBiotype
CIL_0000C3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135750-ENSG00000183780 CGP 9606 1:233614004-234324516
GeneTranscriptPositionBiotype
ENSG00000135750 (KCNK1)
potassium channel, subfamily K, member 1
ENST00000366620 (KCNK1-002) 233629607-233672238 processed_transcript
ENST00000366621 (KCNK1-001) 233614004-233672512 protein_coding
ENST00000446915 (KCNK1-006) 233649941-233671491 protein_coding
ENST00000472190 (KCNK1-003) 233629558-233671699 processed_transcript
ENST00000472869 (KCNK1-005) 233655695-233666686 processed_transcript
ENST00000487728 (KCNK1-004) 233636524-233666990 processed_transcript
ENSG00000183780 (SLC35F3)
solute carrier family 35, member F3
ENST00000366617 (SLC35F3-002) 234214271-234324511 protein_coding
ENST00000366618 (SLC35F3-001) 233904933-234324516 protein_coding
ENSG00000225486 (RP11-301G21.1)
ENST00000453379 (RP11-301G21.1-001) 233836080-233836432 processed_pseudogene
ENSG00000231272 (RP4-799P18.4)
ENST00000456078 (RP4-799P18.4-001) 234261706-234274465 sense_intronic
ENSG00000232166 (RP4-799P18.5)
ENST00000412915 (RP4-799P18.5-001) 234284972-234285541 processed_pseudogene
ENSG00000233332 (RP4-799P18.2)
ENST00000412483 (RP4-799P18.2-001) 234212606-234215088 antisense
ENSG00000236244 (RP4-799P18.3)
ENST00000446433 (RP4-799P18.3-001) 234268583-234272500 antisense
CIL_0000C3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033998-ENSMUSG00000057060 CGP 10090 8:125995102-126395482
GeneTranscriptPositionBiotype
ENSMUSG00000033998 (Kcnk1)
potassium channel, subfamily K, member 1
ENSMUST00000046765 (Kcnk1-201) 125995102-126030683 protein_coding
ENSMUSG00000057060 (Slc35f3)
solute carrier family 35, member F3
ENSMUST00000108759 (Slc35f3-001) 126298558-126395482 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000C3_0002ENSG00000135750ENST00000366620ENST00000366621ENST00000446915ENST00000472190ENST00000472869ENST00000487728ENSG00000183780ENST00000366617ENST00000366618ENSG00000225486ENST00000453379ENSG00000231272ENST00000456078ENSG00000232166ENST00000412915ENSG00000233332ENST00000412483ENSG00000236244ENST00000446433CIL_0000C3_0003ENSMUSG00000033998ENSMUST00000046765ENSMUSG00000057060ENSMUST00000108759
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000C3_0002ENSG00000135750ENST00000366620ENST00000366621ENST00000472190ENST00000487728ENSG00000183780ENST00000366617ENST00000366618ENSG00000225486ENST00000453379ENSG00000231272ENST00000456078ENSG00000232166ENST00000412915ENSG00000233332ENST00000412483ENSG00000236244ENST00000446433CIL_0000C3_0003ENSMUSG00000033998ENSMUST00000046765ENSMUSG00000057060ENSMUST00000108759
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135750 ENST00000366620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.271±0.00
ENST00000366621 0.420±0.00 0.044±0.00 0.250±0.00 7.896±0.13 0.627±0.25 2.258±0.13 3.003±2.55 2.261±2.14 1.108±0.73 3.732±0.00 0.015±0.00 5.510±2.63 4.318±0.54 1.444±1.19
ENST00000446915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472190 N/A N/A 0.838±0.00 5.636±0.62 0.542±0.00 N/A 1.854±1.16 N/A 1.060±0.00 N/A N/A 1.900±0.00 N/A N/A
ENST00000472869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487728 N/A N/A N/A N/A N/A N/A N/A 0.419±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000183780 ENST00000366617 0.005±0.00 0.058±0.00 0.189±0.00 2.750±0.00 0.413±0.39 0.411±0.00 N/A 0.215±0.00 N/A 0.059±0.00 0.189±0.00 0.075±0.04 0.047±0.03 N/A
ENST00000366618 N/A N/A N/A 1.580±1.10 0.011±0.00 N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A 0.123±0.03
ENSG00000225486 ENST00000453379 N/A 0.035±0.00 N/A 0.035±0.00 0.033±0.00 N/A N/A N/A 0.030±0.00 N/A 0.031±0.00 N/A N/A 0.031±0.00
ENSG00000231272 ENST00000456078 N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.192±0.16
ENSG00000232166 ENST00000412915 0.022±0.00 N/A N/A 0.056±0.03 0.092±0.00 N/A N/A N/A N/A 0.021±0.00 0.020±0.00 0.037±0.00 N/A N/A
ENSG00000233332 ENST00000412483 N/A 0.008±0.00 N/A 0.040±0.02 0.063±0.02 0.022±0.00 N/A 0.048±0.00 N/A N/A N/A N/A 0.026±0.00 N/A
ENSG00000236244 ENST00000446433 N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033998 ENSMUST00000046765 7.604±7.52 8.207±4.65 23.514±2.66 8.757±8.62 6.459±1.60 37.962±11.19 0.179±0.12 32.095±5.73 0.075±0.04 6.701±1.83 0.228±0.06 25.113±11.61 6.858±3.39 1.634±0.86
ENSMUSG00000057060 ENSMUST00000108759 0.113±0.06 0.484±0.11 0.016±0.00 2.603±2.32 1.245±0.13 0.061±0.03 0.014±0.00 4.305±0.96 0.010±0.01 0.453±0.20 0.048±0.03 0.400±0.16 0.114±0.10 0.152±0.05

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