C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: isoleucyl-tRNA synthetase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366922 IARS2-001 ENSG00000067704 9606 + 1:220094102-220148041 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366922
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366922 28.347±0.00 20.086±0.00 8.401±0.00 11.440±3.93 19.052±9.99 15.159±3.60 14.910±8.76 20.024±5.49 10.093±4.63 7.961±2.27 10.724±6.10 18.650±6.89 20.079±8.08 26.127±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000123 CIL_000123_0002 CGP 1:220094102-220272454

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0002161 IEA aminoacyl-tRNA editing activity
GO:0003824 IEA catalytic activity
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0004822 IEA isoleucine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IDA:IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006418 TAS:IEA tRNA aminoacylation for protein translation
GO:0006428 IEA isoleucyl-tRNA aminoacylation
GO:0006450 IEA regulation of translational fidelity
GO:0010467 TAS gene expression

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027921 Iars2-001 protein_coding Mus_musculus 0 2536
ENSMUST00000110975 Iars2-005 protein_coding Mus_musculus 0 1906
ENSMUST00000110974 Iars2-004 protein_coding Mus_musculus 0 1445
ENSMUST00000153211 Iars2-003 retained_intron Mus_musculus 0.0000000006 71

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