C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E74-like factor 3 (ets domain transcription factor, epithelial-specific )
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367284 ELF3-001 ENSG00000163435 9606 + 1:202010517-202017188 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungOvaryENST00000367284
Transcript ID Bladder Breast Colon Kidney Liver Lung Ovary
ENST00000367284 1.236±0.00 4.107±0.00 4.903±0.00 14.815±0.00 1.511±0.10 1.274±0.00 17.688±20.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M5 CIL_0001M5_0002 CGP 1:202007945-202133592

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003700 NAS:IEA sequence-specific DNA binding transcription factor activity
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 NAS:IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006954 IEP inflammatory response
GO:0007275 TAS multicellular organismal development
GO:0008544 NAS epidermis development
GO:0030855 IEP epithelial cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0060056 ISS mammary gland involution

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185752 Elf3-002 protein_coding Mus_musculus 0 1210
ENSMUST00000003135 Elf3-001 protein_coding Mus_musculus 0 1086
ENSMUST00000188895 Elf3-003 retained_intron Mus_musculus 0 344

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