C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E74-like factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003135 Elf3-001 ENSMUSG00000003051 10090 - 1:135253575-135258568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyLungOvaryPlacentaENSMUST00000003135
Transcript ID Adipose Bladder Breast Colon Kidney Lung Ovary Placenta
ENSMUST00000003135 5.250±0.57 10.171±1.15 3.049±0.10 83.231±17.93 3.577±0.95 4.605±0.41 6.118±0.88 12.902±8.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001824 IMP blastocyst development
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003713 ISS transcription coactivator activity
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0005737 IEA cytoplasm
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0006954 ISS inflammatory response
GO:0009653 IMP anatomical structure morphogenesis
GO:0030154 IBA cell differentiation
GO:0030198 IMP extracellular matrix organization
GO:0030855 ISS epithelial cell differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060056 IDA mammary gland involution

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359651 ELF3-003 protein_coding Homo_sapiens 0 1086
ENST00000367283 ELF3-002 protein_coding Homo_sapiens 0 1086
ENST00000367284 ELF3-001 protein_coding Homo_sapiens 0 1086
ENST00000446188 ELF3-004 protein_coding Homo_sapiens 0 481
ENST00000475698 ELF3-010 processed_transcript Homo_sapiens 0 425
ENST00000490203 ELF3-005 processed_transcript Homo_sapiens 0 246
ENST00000495848 ELF3-006 processed_transcript Homo_sapiens 0 250

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