C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin carboxyl-terminal hydrolase L5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367455 UCHL5-001 ENSG00000116750 9606 - 1:193012250-193059496 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367455
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367455 2.641±0.00 2.473±0.00 1.407±0.00 4.976±1.41 2.664±0.00 2.854±0.38 3.408±0.94 3.090±0.36 2.018±0.00 1.803±0.00 2.053±0.89 4.586±2.60 1.668±0.80 2.640±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BR CIL_0001BR_0002 CGP 1:192809039-193060080

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0004843 IDA:IEA ubiquitin-specific protease activity
GO:0004866 IMP endopeptidase inhibitor activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0008242 IEA omega peptidase activity
GO:0010951 IMP negative regulation of endopeptidase activity
GO:0016579 IDA protein deubiquitination
GO:0021670 IEA lateral ventricle development
GO:0030512 TAS negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030901 IEA midbrain development
GO:0031011 IDA Ino80 complex
GO:0044822 IDA poly(A) RNA binding
GO:0048853 IEA forebrain morphogenesis
GO:0061136 IMP regulation of proteasomal protein catabolic process
GO:0070628 IDA proteasome binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189936 Uchl5-001 protein_coding Mus_musculus 0 1589
ENSMUST00000018333 Uchl5-002 protein_coding Mus_musculus 0 1554
ENSMUST00000185539 Uchl5-008 nonsense_mediated_decay Mus_musculus 0 632
ENSMUST00000190258 Uchl5-006 retained_intron Mus_musculus 0 588
ENSMUST00000185493 Uchl5-005 protein_coding Mus_musculus 0 558
ENSMUST00000189433 Uchl5-004 retained_intron Mus_musculus 0 431
ENSMUST00000185742 Uchl5-003 retained_intron Mus_musculus 0 309
ENSMUST00000191512 Uchl5-007 retained_intron Mus_musculus 0 233

Loading