C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001BR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056875-ENSDARG00000042635 CGP 7955 22:23560000-23582944
GeneTranscriptPositionBiotype
ENSDARG00000042635 (uchl5)
ubiquitin carboxyl-terminal hydrolase L5 		ENSDART00000105644 (uchl5-001) 23574564-23582944 protein_coding
ENSDARG00000056875 (rgs2)
regulator of G-protein signaling 2 		ENSDART00000079448 (rgs2-001) 23560000-23562207 protein_coding
ENSDART00000150509 (rgs2-002) 23560002-23560544 retained_intron
CIL_0001BR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116741-ENSG00000116750 CGP 9606 1:192809039-193060080
GeneTranscriptPositionBiotype
ENSG00000116741 (RGS2)
regulator of G-protein signaling 2 		ENST00000235382 (RGS2-001) 192809041-192812283 protein_coding
ENST00000464302 (RGS2-003) 192809042-192811239 processed_transcript
ENST00000483295 (RGS2-002) 192809039-192810899 processed_transcript
ENST00000487236 (RGS2-004) 192809143-192811032 processed_transcript
ENSG00000116747 (TROVE2)
TROVE domain family, member 2 		ENST00000367441 (TROVE2-002) 193069016-193084866 protein_coding
ENST00000367443 (TROVE2-003) 193060057-193091777 protein_coding
ENST00000367444 (TROVE2-006) 193060057-193091777 protein_coding
ENST00000367445 (TROVE2-005) 193060057-193091777 protein_coding
ENST00000367446 (TROVE2-001) 193060034-193085985 protein_coding
ENST00000400968 (TROVE2-004) 193059422-193084881 protein_coding
ENST00000415442 (TROVE2-010) 193059619-193075890 protein_coding
ENST00000432079 (TROVE2-008) 193059454-193091219 protein_coding
ENST00000460715 (TROVE2-007) 193059623-193085235 processed_transcript
ENST00000469214 (TROVE2-009) 193059595-193060283 retained_intron
ENST00000506303 (TROVE2-011) 193059659-193069179 protein_coding
ENST00000512587 (TROVE2-012) 193069232-193075931 protein_coding
ENSG00000223075 (RN7SKP126)
RNA, 7SK small nuclear pseudogene 126 		ENST00000411143 (RN7SKP126-201) 192875686-192875985 misc_RNA
ENSG00000234473 (ZNF101P2)
zinc finger protein 101 pseudogene 2 		ENST00000439152 (ZNF101P2-001) 192993449-192994677 processed_pseudogene
ENSG00000234871 (LINC01032)
long intergenic non-protein coding RNA 1032 		ENST00000451690 (LINC01032-001) 192937300-192948257 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BR_0001ENSDARG00000042635ENSDART00000105644ENSDARG00000056875ENSDART00000079448ENSDART00000150509CIL_0001BR_0002ENSG00000116741ENST00000235382ENST00000464302ENST00000483295ENST00000487236ENSG00000116747ENST00000367441ENST00000367443ENST00000367444ENST00000367445ENST00000367446ENST00000400968ENST00000415442ENST00000432079ENST00000460715ENST00000469214ENST00000506303ENST00000512587ENSG00000223075ENST00000411143ENSG00000234473ENST00000439152ENSG00000234871ENST00000451690
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BR_0001ENSDARG00000042635ENSDART00000105644ENSDARG00000056875ENSDART00000079448ENSDART00000150509CIL_0001BR_0002ENSG00000116741ENST00000235382ENSG00000116747ENST00000367441ENST00000367446ENST00000432079ENST00000460715ENSG00000223075ENST00000411143ENSG00000234473ENST00000439152ENSG00000234871ENST00000451690
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042635 ENSDART00000105644 N/A N/A N/A 50.159±11.05 N/A N/A 7.134±5.66 12.927±14.61 1.295±0.00 N/A 6.362±0.00 N/A N/A N/A
ENSDARG00000056875 ENSDART00000079448 N/A N/A N/A 1.675±0.28 N/A N/A 8.548±3.63 9.461±3.03 N/A N/A 4.108±0.00 N/A N/A N/A
ENSDART00000150509 N/A N/A N/A 0.969±0.00 N/A N/A 3.298±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116741 ENST00000235382 6.949±0.00 7.772±0.00 3.391±0.00 7.375±1.85 15.827±2.48 43.148±36.05 4.441±4.02 9.924±8.47 13.650±11.42 32.257±23.57 0.616±0.11 33.594±24.81 28.404±5.88 21.635±9.82
ENST00000464302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000116747 ENST00000367441 N/A N/A 5.124±0.00 6.598±0.00 13.623±0.00 12.281±0.00 N/A 6.498±0.00 N/A 15.078±0.00 1.955±0.00 N/A N/A N/A
ENST00000367443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000367444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000367445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000367446 N/A N/A 2.378±0.00 N/A N/A N/A 5.061±0.00 N/A N/A N/A N/A 16.975±0.00 N/A N/A
ENST00000400968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432079 3.584±0.00 2.402±0.00 N/A 3.888±1.71 4.584±0.38 5.270±2.05 3.839±0.00 2.542±0.67 6.775±5.60 6.253±3.41 2.541±0.00 1.498±0.19 1.288±0.63 3.436±0.68
ENST00000460715 N/A N/A 5.955±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223075 ENST00000411143 N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000234473 ENST00000439152 N/A 0.072±0.00 0.033±0.00 0.043±0.02 0.194±0.18 N/A 0.030±0.01 N/A 0.099±0.08 0.228±0.00 N/A 0.073±0.06 N/A N/A
ENSG00000234871 ENST00000451690 N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A 0.500±0.00

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