C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 1 open reading frame 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367470 C1orf27-201 ENSG00000157181 9606 + 1:186375758-186421367 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverLungOvaryPlacentaENST00000367470
Transcript ID Breast Liver Lung Ovary Placenta
ENST00000367470 0.666±0.00 0.501±0.00 0.870±0.03 1.329±0.00 1.730±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BN CIL_0001BN_0002 CGP 1:186311652-186421378

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097546 BC003331-201 protein_coding Mus_musculus 0 1456
ENSMUST00000006167 BC003331-002 protein_coding Mus_musculus 0 1456
ENSMUST00000094477 BC003331-004 nonsense_mediated_decay Mus_musculus 0 889
ENSMUST00000111913 BC003331-001 protein_coding Mus_musculus 0 889
ENSMUST00000097547 BC003331-003 protein_coding Mus_musculus 0 760
ENSMUST00000148389 BC003331-005 processed_transcript Mus_musculus 0 688
ENSMUST00000150615 BC003331-006 retained_intron Mus_musculus 0 555
ENSMUST00000140112 BC003331-007 retained_intron Mus_musculus 0 329

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