C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centromere protein L
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367710 CENPL-002 ENSG00000120334 9606 - 1:173799850-173824174 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryPlacentaTestisENST00000367710
Transcript ID Breast Ovary Placenta Testis
ENST00000367710 1.165±0.00 1.955±0.00 2.001±0.00 3.731±1.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WG CIL_0001WG_0002 CGP 1:173714941-173824720
CIL_0001WF CIL_0001WF_0002 CGP 1:173799550-173858546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000775 IEA chromosome, centromeric region
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111620 Cenpl-002 protein_coding Mus_musculus 0 1218
ENSMUST00000111618 Cenpl-004 protein_coding Mus_musculus 0 1206
ENSMUST00000028035 Cenpl-001 protein_coding Mus_musculus 0 1096
ENSMUST00000143486 Cenpl-003 nonsense_mediated_decay Mus_musculus 0 966
ENSMUST00000155808 Cenpl-005 processed_transcript Mus_musculus 0 863
ENSMUST00000029674 Efna4-001 protein_coding Mus_musculus 0.000000004 68
ENSMUST00000140795 Abat-002 retained_intron Mus_musculus 0.00000005 64

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