C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Abelson helper integration site 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367800 AHI1-008 ENSG00000135541 9606 - 6:135283532-135497745 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLungOvaryENST00000367800
Transcript ID Adrenal Brain Breast Colon Heart Lung Ovary
ENST00000367800 0.341±0.00 1.268±0.00 0.885±0.00 0.273±0.00 0.217±0.11 0.737±0.00 0.685±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AJ CIL_0009AJ_0001 VISTA 6:134980560-135582914

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001738 ISS morphogenesis of a polarized epithelium
GO:0001750 IEA photoreceptor outer segment
GO:0001947 ISS heart looping
GO:0002092 ISS positive regulation of receptor internalization
GO:0005515 IPI:IEA protein binding
GO:0005813 IDA centrosome
GO:0005814 ISS centriole
GO:0005911 IDA cell-cell junction
GO:0005912 IDA adherens junction
GO:0005929 ISS cilium
GO:0006903 IEA vesicle targeting
GO:0007169 ISS transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007417 ISS central nervous system development
GO:0010628 IEA positive regulation of gene expression
GO:0010842 ISS retina layer formation
GO:0016192 ISS vesicle-mediated transport
GO:0030862 ISS positive regulation of polarized epithelial cell differentiation
GO:0030902 ISS hindbrain development
GO:0031513 ISS nonmotile primary cilium
GO:0033365 IEA protein localization to organelle
GO:0034613 ISS cellular protein localization
GO:0035844 ISS cloaca development
GO:0035845 ISS photoreceptor cell outer segment organization
GO:0036038 ISS TCTN-B9D complex
GO:0036064 IDA ciliary basal body
GO:0039008 ISS pronephric nephron tubule morphogenesis
GO:0039023 ISS pronephric duct morphogenesis
GO:0042384 ISS cilium assembly
GO:0042802 IPI identical protein binding
GO:0043066 ISS negative regulation of apoptotic process
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0050795 ISS regulation of behavior
GO:0060041 IEA retina development in camera-type eye
GO:0060271 ISS cilium morphogenesis
GO:0065001 ISS specification of axis polarity
GO:0070121 ISS Kupffer's vesicle development
GO:0070986 ISS left/right axis specification
GO:0071599 ISS otic vesicle development
GO:0072372 IDA primary cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105525 Ahi1-201 protein_coding Mus_musculus 0 2501

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