C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367821 TBX19-001 ENSG00000143178 9606 + 1:168281040-168314426 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastKidneyLungOvaryTestisENST00000367821
Transcript ID Adrenal Bladder Brain Breast Kidney Lung Ovary Testis
ENST00000367821 0.434±0.00 0.113±0.00 0.256±0.00 0.155±0.00 0.073±0.00 0.687±0.00 1.107±0.09 0.447±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001158 IEA enhancer sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0009653 TAS anatomical structure morphogenesis
GO:0021983 IEA pituitary gland development
GO:0042127 IEA regulation of cell proliferation
GO:0045165 IEA cell fate commitment
GO:0045595 IEA regulation of cell differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027859 Tbx19-001 protein_coding Mus_musculus 0 1736
ENSMUST00000161777 Tbx19-002 processed_transcript Mus_musculus 0 929
ENSMUST00000161144 Tbx19-004 protein_coding Mus_musculus 0 712
ENSDART00000115394 tbx19-201 protein_coding Danio_rerio 0 399
ENSDART00000150167 tbx19-001 protein_coding Danio_rerio 0 399

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