C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: karyopherin alpha 5 (importin alpha 6)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368564 KPNA5-001 ENSG00000196911 9606 + 6:116681187-116735644 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368564
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368564 0.484±0.00 4.576±0.15 1.536±0.14 0.997±0.00 0.755±0.14 0.847±0.00 1.038±0.82 2.295±0.72 0.326±0.14 2.664±0.82 0.407±0.09 2.236±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA:IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006606 IEA protein import into nucleus
GO:0006607 TAS NLS-bearing protein import into nucleus
GO:0008565 IEA protein transporter activity
GO:0019221 TAS cytokine-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004054 Kpna1-001 protein_coding Mus_musculus 0 562
ENSMUST00000172534 Kpna1-004 nonsense_mediated_decay Mus_musculus 0 496
ENSMUST00000173696 Kpna1-003 nonsense_mediated_decay Mus_musculus 0 496
ENSMUST00000173641 Kpna1-009 protein_coding Mus_musculus 9.94922e-44 183

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