C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: karyopherin (importin) alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004054 Kpna1-001 ENSMUSG00000022905 10090 + 16:35983315-36037131 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004054
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004054 5.890±1.01 4.572±1.10 8.592±0.41 13.194±3.03 6.570±2.63 4.059±0.93 10.176±2.13 4.233±0.64 7.622±2.84 5.611±0.91 28.335±1.34 5.346±1.63 11.241±2.99 2.818±1.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006606 IEA protein import into nucleus
GO:0008565 IEA protein transporter activity
GO:0030425 ISS dendrite
GO:0042307 ISS positive regulation of protein import into nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344337 KPNA1-001 protein_coding Homo_sapiens 0 4547
ENST00000356348 KPNA5-201 protein_coding Homo_sapiens 0 562
ENST00000368564 KPNA5-001 protein_coding Homo_sapiens 0 562
ENST00000392517 KPNA5-003 protein_coding Homo_sapiens 0 191
ENST00000464940 KPNA1-011 processed_transcript Homo_sapiens 0 678
ENST00000465882 KPNA1-006 protein_coding Homo_sapiens 0 1461
ENST00000466923 KPNA1-004 processed_transcript Homo_sapiens 0 2702
ENST00000470904 KPNA1-005 processed_transcript Homo_sapiens 0 2820
ENST00000476916 KPNA1-010 protein_coding Homo_sapiens 0 643
ENST00000482287 KPNA1-009 protein_coding Homo_sapiens 0 966
ENST00000485027 KPNA1-003 nonsense_mediated_decay Homo_sapiens 0 1744
ENST00000493510 KPNA1-008 protein_coding Homo_sapiens 0 780
ENST00000494339 KPNA1-002 nonsense_mediated_decay Homo_sapiens 0 1722

Loading