C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: radial spoke head 4 homolog A (Chlamydomonas)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368581 RSPH4A-201 ENSG00000111834 9606 + 6:116616479-116632985 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000368581
Transcript ID Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000368581 0.097±0.04 0.058±0.00 0.027±0.02 0.042±0.00 0.074±0.06 0.083±0.00 0.360±0.00 0.021±0.01 1.455±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005H0 CIL_0005H0_0001 CGP 6:116616479-116668794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001534 ISS radial spoke
GO:0003341 IMP cilium movement
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005856 IEA cytoskeleton
GO:0005930 IC axoneme
GO:0031514 IC motile cilium
GO:0035082 IMP axoneme assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169670 Rsph4a-201 protein_coding Mus_musculus 0 1288
ENSMUST00000118315 Rsph4a-001 protein_coding Mus_musculus 0 1288

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