C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nebulin-related anchoring protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369358 NRAP-202 ENSG00000197893 9606 - 10:113588825-113664070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonMusclePlacentaTestisENST00000369358
Transcript ID Breast Colon Muscle Placenta Testis
ENST00000369358 4.686±4.56 0.055±0.00 187.181±116.66 0.282±0.00 8.903±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OX CIL_0006OX_0001 CGP 10:112950250-113589602
CIL_0006OW CIL_0006OW_0001 CGP 10:113550837-113664127
CIL_0002GC CIL_0002GC_0001 CGP 10:113588716-113730907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005916 IEA fascia adherens
GO:0005927 IEA muscle tendon junction
GO:0008270 IEA zinc ion binding
GO:0017166 IEA vinculin binding
GO:0030016 IEA myofibril
GO:0051371 IEA muscle alpha-actinin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073536 Nrap-001 protein_coding Mus_musculus 0 5363
ENSMUST00000095947 Nrap-003 protein_coding Mus_musculus 0 4300
ENSMUST00000040711 Nrap-002 protein_coding Mus_musculus 0 4300
ENSMUST00000166203 Nrap-006 protein_coding Mus_musculus 0 3749
ENSMUST00000167239 Nrap-004 protein_coding Mus_musculus 0 3474
ENSMUST00000169099 Nrap-005 nonsense_mediated_decay Mus_musculus 0 617

Loading