C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nebulin-related anchoring protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369360 NRAP-003 ENSG00000197893 9606 - 10:113588716-113664046 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryPlacentaENST00000369360
Transcript ID Kidney Liver Ovary Placenta
ENST00000369360 1.464±0.00 8.940±0.00 0.031±0.00 0.461±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OX CIL_0006OX_0001 CGP 10:112950250-113589602
CIL_0006OW CIL_0006OW_0001 CGP 10:113550837-113664127
CIL_0002GC CIL_0002GC_0001 CGP 10:113588716-113730907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005916 ISS fascia adherens
GO:0005927 ISS muscle tendon junction
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0051371 ISS muscle alpha-actinin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040711 Nrap-002 protein_coding Mus_musculus 0 5140
ENSMUST00000095947 Nrap-003 protein_coding Mus_musculus 0 4900
ENSMUST00000167239 Nrap-004 protein_coding Mus_musculus 0 4305
ENSMUST00000073536 Nrap-001 protein_coding Mus_musculus 0 4196
ENSMUST00000166203 Nrap-006 protein_coding Mus_musculus 0 3757
ENSMUST00000169099 Nrap-005 nonsense_mediated_decay Mus_musculus 0 617

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