C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dopey family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369739 DOPEY1-006 ENSG00000083097 9606 + 6:83096729-83168331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000369739
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000369739 1.030±0.00 1.110±0.00 2.294±0.00 0.818±0.00 0.499±0.00 1.487±0.00 0.976±0.00 0.527±0.00 1.882±0.41 1.575±0.00 4.061±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000673 CIL_000673_0001 CGP 6:82892398-83171350
CIL_000672 CIL_000672_0001 CGP 6:83067666-83193936

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0005488 IEA binding
GO:0006895 ISS Golgi to endosome transport
GO:0007029 ISS endoplasmic reticulum organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034987 Dopey1-201 protein_coding Mus_musculus 0 8787
ENSMUST00000190957 Dopey1-004 protein_coding Mus_musculus 0 8787
ENSMUST00000185919 Dopey1-005 nonsense_mediated_decay Mus_musculus 0 6192
ENSMUST00000188675 Dopey1-017 protein_coding Mus_musculus 0 2409
ENSMUST00000189564 Dopey1-014 retained_intron Mus_musculus 0 1921
ENSMUST00000186290 Dopey1-001 retained_intron Mus_musculus 0 1735
ENSMUST00000187348 Dopey1-008 retained_intron Mus_musculus 0 1591
ENSMUST00000186418 Dopey1-012 retained_intron Mus_musculus 0 1500
ENSMUST00000185297 Dopey1-007 protein_coding Mus_musculus 0 1456
ENSMUST00000187607 Dopey1-002 retained_intron Mus_musculus 0 1234
ENSMUST00000190906 Dopey1-003 retained_intron Mus_musculus 0 1234
ENSMUST00000189817 Dopey1-013 nonsense_mediated_decay Mus_musculus 0 1088
ENSMUST00000186715 Dopey1-016 retained_intron Mus_musculus 0 603
ENSMUST00000190407 Dopey1-009 retained_intron Mus_musculus 0 440
ENSMUST00000187427 Dopey1-018 retained_intron Mus_musculus 0 398
ENSMUST00000185840 Dopey1-011 retained_intron Mus_musculus 0 361
ENSMUST00000190834 Dopey1-006 retained_intron Mus_musculus 2e-38 167

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