C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: internexin neuronal intermediate filament protein, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369849 INA-001 ENSG00000148798 9606 + 10:103277163-103290351 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000369849
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000369849 0.040±0.00 33.007±0.00 0.146±0.00 0.008±0.00 0.013±0.00 0.174±0.00 0.042±0.00 0.033±0.03 0.114±0.00 0.899±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HJ CIL_0001HJ_0002 CGP 10:103277163-103351134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005882 IEA intermediate filament
GO:0005883 IEA neurofilament
GO:0021762 IEP substantia nigra development
GO:0030154 IEA cell differentiation
GO:0036464 IDA cytoplasmic ribonucleoprotein granule
GO:0045104 IEA intermediate filament cytoskeleton organization
GO:0060052 IEA neurofilament cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037636 Ina-001 protein_coding Mus_musculus 0 2061
ENSMUST00000172239 Nt5c2-001 protein_coding Mus_musculus 0 610
ENSDART00000018351 protein_coding Danio_rerio 3e-32 145

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