C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 8 family, member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370454 LRRC8C-001 ENSG00000171488 9606 + 1:89633072-89719533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370454
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370454 5.431±0.00 2.247±0.00 1.221±0.00 3.087±1.39 2.392±1.68 1.883±0.14 2.387±0.68 1.299±0.16 1.738±1.29 4.477±1.32 0.460±0.20 1.771±0.70 1.689±0.35 2.553±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069C CIL_00069C_0001 CGP 1:89524836-89769903

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0045444 IEA fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067924 Lrrc8c-001 protein_coding Mus_musculus 0 3005
ENSMUST00000153754 Lrrc8c-004 protein_coding Mus_musculus 0 630

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