C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Dab, reelin signal transducer, homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371236 DAB1-004 ENSG00000173406 9606 - 1:56994778-57424057 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000371236
Transcript ID Ovary
ENST00000371236 0.393±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005G CIL_00005G_0002 CGP 1:56929210-58546734
CIL_00005F CIL_00005F_0002 CGP 1:56994778-58546802

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IEA neuron migration
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0005903 IEA brush border
GO:0007162 IEA negative regulation of cell adhesion
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007420 IEA brain development
GO:0007494 IEA midgut development
GO:0007628 IEA adult walking behavior
GO:0014069 IEA postsynaptic density
GO:0016020 IEA membrane
GO:0016358 IEA dendrite development
GO:0021517 IEA ventral spinal cord development
GO:0021589 IEA cerebellum structural organization
GO:0021795 IEA cerebral cortex cell migration
GO:0021799 IEA cerebral cortex radially oriented cell migration
GO:0021813 IEA cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration
GO:0021942 IEA radial glia guided migration of Purkinje cell
GO:0021987 IEA cerebral cortex development
GO:0042493 IEA response to drug
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0043548 IEA phosphatidylinositol 3-kinase binding
GO:0045177 IEA apical part of cell
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045860 IEA positive regulation of protein kinase activity
GO:0046426 IEA negative regulation of JAK-STAT cascade
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048712 IEA negative regulation of astrocyte differentiation
GO:0050771 IEA negative regulation of axonogenesis
GO:0051645 IEA Golgi localization
GO:0097477 IEA lateral motor column neuron migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106830 Dab1-001 protein_coding Mus_musculus 0 2911
ENSMUST00000146078 Dab1-003 nonsense_mediated_decay Mus_musculus 0 1487
ENSMUST00000106827 Dab1-002 protein_coding Mus_musculus 0 1077
ENSMUST00000143644 Dab1-006 protein_coding Mus_musculus 0 909
ENSMUST00000106826 Dab1-005 protein_coding Mus_musculus 0 813
ENSMUST00000149672 Dab1-008 protein_coding Mus_musculus 0 767
ENSMUST00000141037 Dab1-007 processed_transcript Mus_musculus 0 505

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