C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371588 DPM1-001 ENSG00000000419 9606 - 20:50934867-50958550 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371588
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371588 10.912±0.00 13.959±0.00 0.731±0.00 10.631±3.30 10.065±4.00 8.420±2.94 6.913±2.99 12.247±9.22 6.180±1.15 8.188±0.00 4.116±2.16 16.473±5.74 12.740±2.03 17.753±8.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VZ CIL_0007VZ_0001 VISTA 20:50389770-50992625
CIL_00015P CIL_00015P_0001 CGP 20:50888919-50958555
CIL_000166 CIL_000166_0001 CGP 20:50934867-50963931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004169 IDA dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0004582 IDA dolichyl-phosphate beta-D-mannosyltransferase activity
GO:0005515 IPI protein binding
GO:0005537 IEA mannose binding
GO:0005634 IDA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0006501 TAS C-terminal protein lipidation
GO:0006506 IDA GPI anchor biosynthetic process
GO:0016020 IDA membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019348 IDA dolichol metabolic process
GO:0019673 IEA GDP-mannose metabolic process
GO:0033185 IDA dolichol-phosphate-mannose synthase complex
GO:0035268 IDA protein mannosylation
GO:0035269 IDA protein O-linked mannosylation
GO:0043178 IEA alcohol binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154111 Dpm1-001 protein_coding Mus_musculus 0 989
ENSMUST00000138667 Gm20716-001 nonsense_mediated_decay Mus_musculus 0 942
ENSMUST00000109193 Dpm1-002 protein_coding Mus_musculus 0 863
ENSMUST00000099072 Dpm1-011 nonsense_mediated_decay Mus_musculus 0 756
ENSMUST00000150437 Dpm1-003 processed_transcript Mus_musculus 0 617
ENSMUST00000140249 Dpm1-005 retained_intron Mus_musculus 0 595
ENSMUST00000142482 Dpm1-006 retained_intron Mus_musculus 0 470
ENSMUST00000141036 Dpm1-007 retained_intron Mus_musculus 0 401
ENSMUST00000136582 Dpm1-009 retained_intron Mus_musculus 0 385
ENSMUST00000156800 Dpm1-004 retained_intron Mus_musculus 0 361
ENSMUST00000153258 Dpm1-008 retained_intron Mus_musculus 0 303

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