C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20716
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138667 Gm20716-001 ENSMUSG00000093752 10090 - 2:168180986-168230364 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000138667
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000138667 8.352±0.00 14.463±3.54 11.401±0.21 8.820±2.16 8.735±3.26 9.540±1.21 4.227±1.81 7.596±2.92 7.601±2.21 11.087±4.59 6.336±1.04 16.414±3.87 16.326±5.10 13.927±5.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VZ CIL_0007VZ_0002 VISTA 2:167749064-168350864
CIL_00015P CIL_00015P_0002 CGP 2:168180986-168230591
CIL_0002BH CIL_0002BH_0002 CGP 2:168180986-168230364

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004169 ISS dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0004582 ISS dolichyl-phosphate beta-D-mannosyltransferase activity
GO:0005789 ISS endoplasmic reticulum membrane
GO:0006506 ISS GPI anchor biosynthetic process
GO:0035268 ISS protein mannosylation
GO:0035269 ISS protein O-linked mannosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349014 ADNP-003 protein_coding Homo_sapiens 0 5059
ENST00000371582 DPM1-005 protein_coding Homo_sapiens 0 531
ENST00000371584 DPM1-003 protein_coding Homo_sapiens 0 531
ENST00000371588 DPM1-001 protein_coding Homo_sapiens 0 942
ENST00000371602 ADNP-001 protein_coding Homo_sapiens 0 5062
ENST00000396029 ADNP-002 protein_coding Homo_sapiens 0 5057
ENST00000396032 ADNP-006 protein_coding Homo_sapiens 0 5060
ENST00000413082 DPM1-004 protein_coding Homo_sapiens 0 398
ENST00000466152 DPM1-002 processed_transcript Homo_sapiens 0 841
ENST00000494752 DPM1-006 processed_transcript Homo_sapiens 0 418
ENST00000534467 ADNP-005 protein_coding Homo_sapiens 0 869
ENST00000621696 ADNP-201 protein_coding Homo_sapiens 0 5057

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