C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-cell acute lymphocytic leukemia 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371884 TAL1-001 ENSG00000162367 9606 - 1:47216290-47231715 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371884
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371884 2.851±0.00 1.618±0.00 0.239±0.00 0.390±0.07 0.481±0.04 0.144±0.00 0.810±0.65 0.732±0.50 0.511±0.00 5.014±0.00 0.088±0.00 0.637±0.36 2.529±0.17 0.779±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0000790 IDA nuclear chromatin
GO:0001085 IPI RNA polymerase II transcription factor binding
GO:0003682 IDA chromatin binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0019899 IPI enzyme binding
GO:0030097 ISS hemopoiesis
GO:0030218 IMP erythrocyte differentiation
GO:0030219 IEP megakaryocyte differentiation
GO:0030221 IEP basophil differentiation
GO:0031334 IDA positive regulation of protein complex assembly
GO:0033193 IDA Lsd1/2 complex
GO:0035162 ISS embryonic hemopoiesis
GO:0042826 IPI histone deacetylase binding
GO:0044212 ISS transcription regulatory region DNA binding
GO:0045165 ISS cell fate commitment
GO:0045648 ISS positive regulation of erythrocyte differentiation
GO:0045799 IMP positive regulation of chromatin assembly or disassembly
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045931 IMP positive regulation of mitotic cell cycle
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0051781 IMP positive regulation of cell division
GO:0070888 IDA E-box binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030489 Tal1-001 protein_coding Mus_musculus 0 1731
ENSMUST00000162489 Tal1-004 protein_coding Mus_musculus 0 1731
ENSMUST00000161601 Tal1-003 protein_coding Mus_musculus 0 1731
ENSMUST00000136946 Tal1-002 protein_coding Mus_musculus 0 603

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