C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidic acid phosphatase type 2 domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372264 PPAPDC3-001 ENSG00000160539 9606 + 9:131289694-131309262 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372264
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372264 2.737±0.00 2.062±0.00 3.775±0.84 4.511±3.35 2.877±0.00 18.889±14.58 1.317±0.00 0.269±0.24 0.344±0.00 37.252±24.56 3.428±3.20 0.805±0.35 3.045±1.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0001 VISTA 9:131030990-131632063
CIL_0002VI CIL_0002VI_0002 CGP 9:131258076-131309262
CIL_0002ED CIL_0002ED_0002 CGP 9:131289694-131500197

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005635 IEA nuclear envelope
GO:0005783 IEA endoplasmic reticulum
GO:0008152 IEA metabolic process
GO:0010832 IEA negative regulation of myotube differentiation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057423 Ppapdc3-001 protein_coding Mus_musculus 0 1149
ENSMUST00000146502 Ppapdc3-002 processed_transcript Mus_musculus 0 477
ENSMUST00000140762 Ppapdc3-003 processed_transcript Mus_musculus 0 473

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