C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD40 molecule, TNF receptor superfamily member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372285 CD40-001 ENSG00000101017 9606 + 20:46118272-46129863 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372285
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372285 7.100±0.00 0.348±0.00 0.385±0.02 1.414±1.09 0.389±0.00 0.846±0.61 1.590±0.29 1.691±0.72 0.526±0.00 1.853±0.00 2.183±1.72 4.908±1.67 0.803±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BI CIL_0007BI_0001 CGP 20:46060985-46129863

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001934 IMP positive regulation of protein phosphorylation
GO:0002768 IEA immune response-regulating cell surface receptor signaling pathway
GO:0003823 IEA antigen binding
GO:0004871 TAS signal transducer activity
GO:0004872 TAS receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005886 ISS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006461 TAS protein complex assembly
GO:0006874 IMP cellular calcium ion homeostasis
GO:0006954 IEA inflammatory response
GO:0009897 IEA external side of plasma membrane
GO:0009986 IDA cell surface
GO:0019899 IPI enzyme binding
GO:0030168 NAS platelet activation
GO:0030890 IEA positive regulation of B cell proliferation
GO:0031625 IPI ubiquitin protein ligase binding
GO:0032735 IEA positive regulation of interleukin-12 production
GO:0032855 IMP positive regulation of Rac GTPase activity
GO:0035631 ISS CD40 receptor complex
GO:0042100 NAS B cell proliferation
GO:0042113 IEA B cell activation
GO:0042511 IMP positive regulation of tyrosine phosphorylation of Stat1 protein
GO:0043089 IMP positive regulation of Cdc42 GTPase activity
GO:0043123 IEP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043406 IMP positive regulation of MAP kinase activity
GO:0043491 IEA protein kinase B signaling
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0048304 IEA positive regulation of isotype switching to IgG isotypes
GO:0050776 TAS regulation of immune response
GO:0051023 IEA regulation of immunoglobulin secretion
GO:0051092 IMP positive regulation of NF-kappaB transcription factor activity
GO:0051607 IEA defense response to virus
GO:0070062 IDA extracellular vesicular exosome
GO:0071222 IEA cellular response to lipopolysaccharide
GO:0071260 IEP cellular response to mechanical stimulus
GO:0090037 IMP positive regulation of protein kinase C signaling
GO:2000353 IDA positive regulation of endothelial cell apoptotic process

Homologs

No Homologs available.

Loading