C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipid transfer protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372431 PLTP-001 ENSG00000100979 9606 - 20:45898760-45912147 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372431
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372431 408.786±0.00 265.372±0.00 33.685±27.86 65.704±46.53 29.014±23.77 25.082±22.74 31.602±28.20 17.714±8.72 43.102±35.87 16.636±13.93 98.466±70.03 303.513±51.08 91.125±74.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GL CIL_0006GL_0001 CGP 20:45888625-45898820
CIL_0006IQ CIL_0006IQ_0002 CGP 20:45890144-45912155
CIL_0006IV CIL_0006IV_0002 CGP 20:45898621-45948023

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 TAS extracellular region
GO:0005615 IDA extracellular space
GO:0006629 TAS lipid metabolic process
GO:0006869 IEA lipid transport
GO:0008289 IEA lipid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059954 Pltp-001 protein_coding Mus_musculus 0 1356
ENSMUST00000109316 Pltp-003 protein_coding Mus_musculus 0 1356
ENSMUST00000109317 Pltp-002 protein_coding Mus_musculus 0 881
ENSMUST00000148912 Pltp-004 processed_transcript Mus_musculus 0 425

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