C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372455 MED8-001 ENSG00000159479 9606 - 1:43384726-43389784 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000372455
Transcript ID Adipose Adrenal Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000372455 3.646±0.00 3.665±0.00 4.930±0.00 3.163±1.64 2.473±0.00 4.889±0.00 5.403±0.00 2.870±0.00 5.904±0.00 6.343±1.38 5.793±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B4 CIL_0005B4_0002 CGP 1:43383917-43452650

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0010467 TAS gene expression
GO:0016567 IEA protein ubiquitination
GO:0016592 IDA:IEA mediator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019229 Med8-001 protein_coding Mus_musculus 0 1240
ENSMUST00000084319 Med8-003 protein_coding Mus_musculus 0 1186
ENSMUST00000135201 Med8-009 processed_transcript Mus_musculus 0 756
ENSMUST00000106384 Med8-201 protein_coding Mus_musculus 0 579
ENSMUST00000073881 Med8-002 protein_coding Mus_musculus 0 579
ENSMUST00000144577 Med8-005 protein_coding Mus_musculus 0 553
ENSMUST00000130421 Med8-008 processed_transcript Mus_musculus 0 531
ENSMUST00000126089 Med8-004 protein_coding Mus_musculus 0 326
ENSMUST00000152633 Med8-006 processed_transcript Mus_musculus 0 259

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