C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372462 CDC20-002 ENSG00000117399 9606 + 1:43359013-43363203 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartPlacentaENST00000372462
Transcript ID Colon Heart Placenta
ENST00000372462 0.557±0.00 0.393±0.00 1.456±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0001 VISTA 1:42758169-43359178
CIL_0005B3 CIL_0005B3_0002 CGP 1:43358955-43368074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005680 IDA anaphase-promoting complex
GO:0005737 IDA cytoplasm
GO:0005813 IEA centrosome
GO:0005819 TAS spindle
GO:0005829 TAS cytosol
GO:0007049 TAS cell cycle
GO:0007067 IEA mitotic nuclear division
GO:0007094 TAS mitotic spindle assembly checkpoint
GO:0008022 IPI protein C-terminus binding
GO:0008284 IEA positive regulation of cell proliferation
GO:0016567 IEA protein ubiquitination
GO:0019899 IPI enzyme binding
GO:0031145 IDA anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031915 ISS positive regulation of synaptic plasticity
GO:0040020 IEA regulation of meiosis
GO:0043234 IEA protein complex
GO:0048471 IEA perinuclear region of cytoplasm
GO:0050773 IEA regulation of dendrite development
GO:0051436 TAS negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 TAS positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051488 IDA activation of anaphase-promoting complex activity
GO:0090129 ISS positive regulation of synapse maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006565 Cdc20-001 protein_coding Mus_musculus 0 1820
ENSMUST00000117514 Gm7856-001 processed_pseudogene Mus_musculus 0 1454
ENSMUST00000118843 Gm15043-001 processed_pseudogene Mus_musculus 0 896
ENSMUST00000151302 Cdc20-004 retained_intron Mus_musculus 0 544
ENSMUST00000183942 Cdc20-003 nonsense_mediated_decay Mus_musculus 0 357

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