C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTP synthase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372621 CTPS1-001 ENSG00000171793 9606 + 1:40979335-41012565 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372621
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372621 1.895±0.00 5.021±0.00 1.712±0.00 1.414±0.00 2.172±1.70 2.082±0.00 1.717±0.00 5.307±4.68 4.605±0.00 6.488±0.00 5.300±3.53 3.392±2.11 9.778±7.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JG CIL_0004JG_0002 CGP 1:40861051-41012565
CIL_0009C0 CIL_0009C0_0001 VISTA 1:40944924-41547265
CIL_000876 CIL_000876_0001 VISTA 1:40945428-41547337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003883 IDA:IEA CTP synthase activity
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006221 IEA pyrimidine nucleotide biosynthetic process
GO:0006241 IDA CTP biosynthetic process
GO:0006541 IEA glutamine metabolic process
GO:0015949 TAS nucleobase-containing small molecule interconversion
GO:0016020 IDA membrane
GO:0016787 IEA hydrolase activity
GO:0042098 IMP T cell proliferation
GO:0042100 IMP B cell proliferation
GO:0042493 TAS response to drug
GO:0044210 IEA 'de novo' CTP biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030381 Ctps-001 protein_coding Mus_musculus 0 2477
ENSMUST00000118585 Gm16465-001 processed_pseudogene Mus_musculus 0 1857
ENSMUST00000140891 Ctps-002 processed_transcript Mus_musculus 0 442
ENSMUST00000190713 RP24-423I20.2-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000147980 Ctps-003 processed_transcript Mus_musculus 7e-34 150

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