C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nerve growth factor receptor (TNFRSF16) associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372634 NGFRAP1-004 ENSG00000166681 9606 + X:103376916-103378071 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372634
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372634 20.464±0.00 55.793±0.00 363.691±0.00 48.379±0.00 61.990±0.00 31.595±0.00 99.659±0.00 11.887±0.00 39.904±0.00 1.944±0.66 157.040±110.40 27.680±1.01 160.776±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000726 CIL_000726_0001 CGP X:103356445-103378077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006919 TAS activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007275 TAS multicellular organismal development
GO:0008656 TAS cysteine-type endopeptidase activator activity involved in apoptotic process
GO:0043281 TAS regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0046872 IEA metal ion binding
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0097190 TAS apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178632 Ngfrap1-201 protein_coding Mus_musculus 0 448
ENSMUST00000113113 Ngfrap1-003 protein_coding Mus_musculus 0 448
ENSMUST00000113112 Ngfrap1-002 protein_coding Mus_musculus 0 448
ENSMUST00000053540 Ngfrap1-001 protein_coding Mus_musculus 0 448

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